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ICFORD is directing and coordinating research conducted by the Indonesian Center for Rice Research (ICRR) in Sukamandi, West Java; the Indonesian Cereals Research Institute (ICERI) in Maros, South Sulawesi; Indonesian Legumes and Tuber Crops Research Institute (ILETRI) in Malang, East Java; and the Tungro Diseases Research Station (TUNDRES) in Lanrang, South Sulawesi. 

Structurally ICFORD is headed by a director who is assisted by the Head of Administration, the head of Program and Evaluation, and the head of Research Collaboration and Disemination. These three divisions are supporte by two sub-divisions each. The director also supported by  Policy Analysis Research Group.